Krystian Mokrzyński
Assistant Professor · Dept of Biophysics · Jagiellonian University in Krakow

Featured publications

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Recent publications

All publications
International Journal of Molecular Sciences · January 2026

Pmel17 Deficiency Affects Melanogenesis and Promotes Tumor Vascularization

Sopel J., Sarad K., Kozińska A., Mokrzyński K., Szczygieł D., Murzyn A., Drzał A., Słomiński A., Szczygieł M., Elas M.

Abstract

Premelanosomal protein (Pmel, also known as Pmel17) is the major component of melanosomal fibrils and plays a key role in melanin polymerization, making it an important factor in melanogenesis. We investigated how the absence of Pmel affects the properties of B16F10 melanoma cells. Pmel-knockout B16F10 cells were generated using CRISPR/Cas9-mediated genome editing. A viability assay revealed no significant differences between wild-type (WT) and Pmel-knockout (KO) sublines; however, melanosome maturation was impaired. In Pmel KO cells, the cell cycle was disrupted, and higher levels of reactive oxygen species (ROS) were observed compared with WT cells. Moreover, the migration capacity and tube formation of melanoma cells were increased. Tumors derived from Pmel KO cells exhibited unchanged growth kinetics but reduced melanin content, along with enhanced vascularization and oxygenation. Thus, knockout of the Pmel17 gene in melanoma cells alters pigmentation, vascularization, and oxygenation of tumors. These parameters are crucial for both tumor progression and therapeutic response.

Antimicrobial Agents and Chemotherapy · August 2025

Allelopathic compound 2-methoxy-1,4-naphthoquinone is broadly effective against pathogenic Prototheca species in vitro and in vivo

Aliramezani A., Szewczyk G., Mokrzyński K., Ciastoń I., Nowicka B., Kwieciński JM.

Abstract

Unpigmented, yeast-like Prototheca algae are emerging pathogens responsible for unusual infections in humans and animals. Their treatment is often unsuccessful, as traditional antifungals and antibacterials show unsatisfactory activity against Prototheca. Therefore, the development of improved drugs that consider the peculiarities of algal biology is needed. Here, we describe a novel anti-Prototheca compound, the 2-methoxy-1,4-naphthoquinone, identified among molecules known to mediate plant and algal allelopathy. The 2-methoxy-1,4-naphthoquinone was highly active in vitro against a range of Prototheca isolates from different species, both planktonically and in biofilms. Its mode of action included the induction of toxic reactive oxygen species, and it targeted energy generation in the pathogen’s mitochondria. It effectively treated Prototheca bovis skin infection in a mouse model, demonstrating translational potential. Altogether, this study not only identified a new effective anti-Prototheca compound, but also identified 1,4-naphthoquinone backbone as a lead structure for further therapeutic development and demonstrated the feasibility of exploring known anti-plant compounds as a source of anti-Prototheca treatments.

Photochemistry and Photobiology · May 2025

The (un)known issue with using rose bengal as a standard of singlet oxygen photoproduction

Mokrzyński K., Szewczyk G.

Abstract

Rose bengal (RB) is a widely used photosensitizer for determining quantum yields of singlet oxygen generation. While it is known to aggregate in polar environments at concentrations above 2 μM, the relationship between RB concentration and singlet oxygen photogeneration remains unclear. This study investigates the shift from monomeric to dimeric RB with increasing concentration and its impact on singlet oxygen generation in D2O-based solutions and DMPC liposomes. Absorbance maxima for RB were observed at 514 nm (dimer) and 549 nm (monomer), with ionic environments influencing aggregation rates. Singlet oxygen phosphorescence showed non-linear dependency above 2  μM, indicating the effects of aggregation. Results suggest that RB concentrations should be kept at 1 μM or lower in photochemical studies to avoid aggregation-related discrepancies in singlet oxygen yield determination. These findings highlight the importance of considering RB aggregation in photochemical research and medical applications.

International Journal of Molecular Sciences · April 2025

Photoreactive Properties of Melanin Obtained from Human Induced Pluripotent Stem Cell-Derived Melanocytes

Mokrzyński K., Wojtała M., Sułkowski M., Ito S., Wakamatsu K., Żądło A., Majka M., Sarna T., Sarna M.

Abstract

Although melanin is viewed as a natural sunscreen that protects pigmented cells against the adverse effects of solar radiation, recent studies have demonstrated that, under certain conditions, the pigment can actually contribute to light-induced oxidative damage of the cells. However, the main issue with such studies is finding natural pigments without photooxidative modifications. Recently, melanin obtained from melanocytes, generated from human induced pluripotent stem cells (hiPSC-Mel), was suggested as a promising source of the pigment without significant photooxidation. Although different studies have demonstrated the feasibility of the above-mentioned technique to obtain melanin-producing cells, no thorough analysis of the physicochemical properties of the pigment has been performed. To address this issue, we examined the key physicochemical parameters, including the aerobic photoreactivity of melanin isolated from hiPSC-Mel and compared them with those of melanin from other known sources of the pigment, such as bovine retinal pigment epithelium (bRPE) and phototype V (PT-V) hair. Electron paramagnetic resonance (EPR) spectroscopy, dynamic light scattering, UV–Vis absorption and HPLC analysis of melanin degradation products were used. The ability of the examined melanins to photogenerate reactive oxygen species was determined by employing EPR oximetry, EPR spin-trapping and time-resolved singlet oxygen phosphorescence. Although the results of such measurements demonstrated that melanin obtained from hiPSC-Mel exhibited the physicochemical properties typical for eumelanin, a contribution from pheomelanin with a substantial presence of benzothiazine subunits, was also evident. Importantly, the hiPSC-Mel pigment had significantly lower photoreactivity compared to bRPE melanin and PT-V hair melanin. Our findings indicate that hiPSC-Mel could be an excellent source of high-quality pigment for photoprotection studies.

Molecules · March 2025

Concentration-Dependent Photoproduction of Singlet Oxygen by Common Photosensitizers

Szewczyk G., Mokrzyński K.

Abstract

Singlet oxygen quantum yield (ΦΔ) is a critical parameter in photodynamic studies, particularly for evaluating photosensitizers’ efficiency in diverse applications such as photodynamic therapy and environmental remediation. Standard photosensitizers, including Rose Bengal, Methylene Blue, and porphyrins, are widely employed as benchmarks for determining ΦΔ. However, accurate determination of ΦΔ relies not only on the intrinsic properties of these photosensitizers but also on their experimental conditions, such as concentration. This study investigated the influence of photosensitizer concentration on singlet oxygen quantum yield using several standard photosensitizers. Our findings revealed a significant decrease in ΦΔ with increasing photosensitizer concentrations across all tested compounds. This decline was attributed to self-quenching effects and molecular aggregation, which reduced the efficiency of energy transfer from the excited triplet state of the photosensitizer to molecular oxygen. The results emphasize the importance of optimizing photosensitizer concentration to ensure reliable ΦΔ measurements and avoid underestimations. This work underscores the need to consider concentration-dependent effects in future studies to ensure accurate and reproducible outcomes.

Scientific Reports · January 2025

Synthesis and characterization of allomelanin model from 1,8-dihydroxynaphthalene autooxidation

Pukalski J.*, Mokrzyński K.*, Chyc M., Potrzebowski MJ. Makowski T., Dulski M., Latowski D.

Abstract

In this work a novel method for synthesis of 1,8-dihydroxynaphthalene melanin was presented, as well as the physicochemical properties, molecular structure, and characteristics of the pigment. The proposed synthesis protocol is simple and cost-effective with no enzymes or catalysts needed. The final product is not adsorbed on any surface, since the pigment is the result of autooxidation of 1,8-dihydroxynaphthalene. Performed analyses revealed that the solubility, optical and paramagnetic properties are typical for melanins, and in the EPR spectra an unusual hyperfine structure was observed. The molecular structure of the pigment consists of three different layers forming polar and non-polar surfaces. Additionally, the presence of ether bonds presence was revealed. The developed method creates new opportunities for melanin research and eliminates the need to extract melanins from biological samples, which often lead to structural changes in isolated melanins, which undermines the reliability of analyses of the properties and structure of these polymers. On the other hand, the ubiquity of melanins in living organisms and the diversity of their biological functions have let to the growing interest of researchers in this group of pigments. The analyses carried out show that the obtained synthetic DHN polymer can be considered as a model DHN-melanin in mycological studies and material research.

Photochemical & Photobiological Sciences · September 2024

Generation of singlet oxygen inside living cells: correlation between phosphorescence decay lifetime, localization and outcome of photodynamic action

Szewczyk G., Mokrzyński K., Sarna T.

Abstract

Photodynamic therapy (PDT) is a promising alternative treatment for localized lesions and infections, utilizing reactive oxygen species (ROS) generated by photosensitizers (PS) upon light activation. Singlet oxygen (1O2) is a key ROS responsible for photodynamic damage. However, the effectiveness of PS in biological systems may not correlate with the efficiency of singlet oxygen generation in homogeneous solutions. This study investigated singlet oxygen generation and its decay in various cellular microenvironments using liposome and ARPE-19 cell models. Rose Bengal (RB), methylene blue (MB), and protoporphyrin IX (PpIX) were employed as selected PS. Lifetimes of singlet oxygen generated by the selected photosensitizers in different cellular compartments varied, indicating different quenching rates with singlet oxygen. RB, located near cell membranes, exhibited the highest phototoxicity and lipid/protein peroxidation, followed by PpIX, while MB showed minimal cytotoxicity in similar conditions. Singlet oxygen decay lifetimes provide insights into PS localization and potential phototoxicity, highlighting the importance of the lipid microenvironment in PDT efficacy, providing useful screening method prior to in vivo applications.

Chemistry of Materials · June 2024

Water-Soluble Type I Radical Photoinitiators Dedicated to Obtaining Microfabricated Hydrogels

Tomak W., Petko F., Gałek M., Świeży A., Tyszka-Czochara M., Środa P., Mokrzyński K., Ortyl J.

Abstract

Herein, five previously unknown benzoin ketal-based derivatives are presented as water-soluble, type I photoinitiators of free-radical photopolymerization processes for biomedical applications. Excellent spectroscopic properties of these compounds in the longwave ultraviolet and visible range up to 500 nm, enhanced solubility in water, and low cytotoxicity have been successfully proved, marking a significant advance over commonly used photoinitiators for biomedical applications. The developed new benzoin derivatives have been found to be effective in photoinitiating the free-radical polymerization of acrylate monomers, including the formation of hydrogel materials in aqueous media. In addition, these compounds can be used in advanced applications, including manufacturing of a hydrogel extracellular matrix with complex geometries using VAT printing. The described research represents a significant advance in the development of water-soluble photoinitiators for biomedical applications.

Conferences

All conferences
55th Annual Meeting of the European Society for Dermatological Reeearch 2026 Dual Role of Sorbic Derivatives in Melanin Photoprotection: Probing and Quenching Triplet-State Photoreactivity Mokrzyński K., Szewczyk G., Sarna T. Heidelberg, Germany talk Conference ↗
50th FEBS Congress 2026 From Triplet Quenching to Photoprotection: Sorbic Derivatives Reduce Singlet-Oxygen–Driven Melanin Photodegradation and ARPE-19 cell damage Mokrzyński K., Kowalczyk A., Szewczyk G., Sarna T. Maastricht, Netherlands Presenting author poster
4th European Symposium on Phytochemicals in Medicine and Food 2026 Antioxidant and photoprotective effects of Rosa rugosa pomace extracts: EPR, spectrophotometric analysis and keratinocyte–melanocyte co-culture studies Kowalska G., Mokrzyński K., Rzepkowska G., Oracz J. Aveiro, Portugal co-author talk
26th International Pigment Cell Conference 2026 The effect of solar irradiation on roughness and nanomechanical properties of melanocytes Poręba Ł., Fil M., Mokrzyński K., Sarna M. New Delhi, India co-author poster
43rd American Society for Photobiology Biennial Meeting 2026 Monitoring the triplet excited states of synthetic and natural melanins by application of diene probes with different electric charge Mokrzyński K., Szewczyk G., Sarna T. Scottsdale, AZ, USA Co-author talk
2nd Junior Meeting of the European Society for Photobiology 2026 Triplet-state reactivity of eumelanin and pheomelanin probed by time-resolved singlet oxygen phosphorescence Mokrzyński K., Szewczyk G., Sarna T. online presenting author talk
53rd Winter School of FBBB 2026 2026 Analysis of changes in roughness and nanomechanical properties of melanocytes irradiated with a solar simulator Poręba Ł., Mokrzyński K., Sarna M. Stryszawa, Poland co-author poster
53rd Winter School of FBBB 2026 2026 Mapping of the triplet excited states of melanins using time-resolved singlet oxygen phosphorescence detection Mokrzyński K., Szewczyk G., Sarna T. Stryszawa, Poland presenting author talk Conference ↗

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