Krystian Mokrzyński
Assistant Professor · Dept of Biophysics · Jagiellonian University in Krakow

About me

I’m a researcher working at the interface of biophysics, photochemistry, and pigment biology, with a primary focus on the photophysical and photochemical behavior of melanin. My work is focused mainly on melanin's shift from photoprotection to photoreactivity and understanding the mechanisms behind the process. This mechanistic perspective is particularly relevant for understanding light-induced melanoma, where melanin-mediated photochemistry may contribute to oxidative stress, DNA damage, and altered cellular signaling following UV and visible light exposure.

I also investigate air-pollution–related phototoxicity, focusing on how PM2.5 components can become even more harmful under light exposure. In these studies, I examine light-amplified skin toxicity by combining controlled solar-simulated irradiation protocols with molecular and cellular readouts of oxidative stress and damage pathways and spectroscopic observation of light-induced mechanisms.

In parallel, I am building Python-based analytical tools tailored not only for photophysical and photobiological lab

In addition to research, I am actively involved in teaching and mentoring. I supervise student research projects and contribute to laboratory and theoretical courses covering (photo(bio))physics, data analysis and the use of AI tools in research. Methodologically, my work integrates EPR spectroscopy, optical spectroscopies, time-resolved singlet oxygen detection and cell-based models, with an emphasis on connecting physical measurements to biologically meaningful endpoints.

Teaching

My teaching experience is mostly focused on physics and its multiple variations, teaching courses like:

• Supplementary course in physics

• General physics

• Biophysics

• Photobiophysics

for the students at the Faculty of Biochemistry, Biophysics and Biotechnology and the Faculty of Biology at JU.

In the past years, I have been introducing students to the pros and cons of, and the most efficient ways to harness generative AI models in research and data analysis as a part of the course: "Cognitive tools in scientific work - how to verify facts and use AI tools" (now "AI tools in research").

I was also involved, both as a scientist conducting workshops and as the organizer, in multiple science-promoting events, including "Bio is cool", "Malopolska Educational Cloud" and "Malopolska Researchers' Night".

Featured publications

May, 2024 Pigment Cell & Melanoma Research
The effect of oxidative degradation of Dopa-melanin on its basic physicochemical properties and photoreactivity
Mokrzyński K., Żądło A., Szewczyk G., Sarna M., Sarna T., Ito S., Wakamatsu K., Sarna T.
Melanin, particularly eumelanin, is commonly viewed as an efficient antioxidant and photoprotective pigment. Nonetheless, the ability of melanin to photogenerate reactive oxygen species and sensitize the formation of cyclobutane pyrimidine dimers may contribute to melanin-dependent phototoxicity. The phototoxic potential of melanin depends on a variety of factors, including molecular composition, redox state, and degree of aggregation. Using complementary spectroscopic and analytical methods we analyzed the physicochemical properties of Dopa-melanin, a synthetic model of eumelanin, subjected to oxidative degradation induced by aerobic photolysis or exposure to 0.1 M hydrogen peroxide. Both modes of oxidative degradation were accompanied by dose-dependent bleaching of melanin and irreversible modifications of its paramagnetic, ion- and electron-exchange and antioxidant properties. Bleached melanin exhibited enhanced efficiency to photogenerate singlet oxygen in both UVA and short-wavelength visible light. Although chemical changes of melanin subunits, including a relative increase of DHICA content and disruption of melanin polymer induced by oxidative degradation were considered, these two mechanisms may not be sufficient for a satisfactory explanation of the elevated photosensitizing ability of the bleached eumelanin. This study points out possible adverse changes in the photoprotective and antioxidant properties of eumelanin that could occur in pigmented tissues after exposure to high doses of intense solar radiation.
June, 2023 Journal of Photochemistry and Photobiology B: Biology
Photoreactivity and phototoxicity of experimentally photodegraded hair melanosomes from individuals of different skin phototypes
Mokrzyński K., Sarna M., Sarna T.
Even though melanin is commonly viewed as natural photoprotectant, the pigment demonstrates residual photoreactivity, which under certain conditions could contribute to UVA-dependent melanomagenesis. Skin melanin is constantly exposed to external stressors, including solar radiation, which could induce photodegradation of the pigment. Although photodegradation of melanin pigments was studied in synthetic models and RPE melanosomes, photochemical and photobiological effects of experimental photodegradation of human skin melanin of different chemical composition remain unknown. In this work, melanosomes isolated from hair of individuals of different skin phototypes (I-III, V) were exposed to high-intensity violet light and its impact on physical and chemical properties of the pigments were analyzed using electron paramagnetic resonance (EPR), spectrophotometry and dynamic light scattering (DLS). Photoreactivity of photodegraded melanins was examined by EPR oximetry, EPR spin-trapping and time-resolved singlet oxygen phosphorescence. Antioxidant potential of the pigments was measured using the EPR DPPH assay. Cellular effect of the exposure of melanosome-loaded HaCaT cells to UV–Vis light was determined by MTT assay, JC-10 assay, and iodometric assay. The data revealed that experimental photodegradation increased photoreactivity of natural melanins, while decreasing their antioxidant capacity. Photodegraded melanin was responsible for higher cell death, a decrease in mitochondrial membrane potential and elevated levels of lipid hydroperoxides.
September, 2021 International Journal of Molecular Sciences
Fine Particulate Matter-Induced Oxidative Stress Mediated by UVA-Visible Light Leads to Keratinocyte Damage
Mokrzyński K., Krzysztyńska-Kuleta O., Zawrotniak M., Sarna M., Sarna T
The human skin is exposed to various environmental factors including solar radiation and ambient air pollutants. Although, due to its physical and biological properties, the skin efficiently protects the body against the harm of environmental factors, their excessive levels and possible synergistic action may lead to harmful effects. Among particulate matter present in ambient air pollutants, PM2.5 is of particular importance for it can penetrate both disrupted and intact skin, causing adverse effects to skin tissue. Although certain components of PM2.5 can exhibit photochemical activity, only a limited amount of data regarding the interaction of PM2.5 with light and its effect on skin tissue are available. This study focused on light-induced toxicity in cultured human keratinocytes, which was mediated by PM2.5 obtained in different seasons. Dynamic Light Scattering (DLS) and Atomic Force Microscopy (AFM) were employed to determine sizes of the particles. The ability of PM2.5 to photogenerate free radicals and singlet oxygen was studied using EPR spin-trapping and time-resolved singlet oxygen phosphorescence, respectively. Solar simulator with selected filters was used as light source for cell treatment to model environmental lightning conditions. Cytotoxicity of photoexcited PM2.5 was analyzed using MTT assay, PI staining and flow cytometry, and the apoptotic pathway was further examined using Caspase-3/7 assay and RT-PCR. Iodometric assay and JC-10 assay were used to investigate damage to cell lipids and mitochondria. Light-excited PM2.5 were found to generate free radicals and singlet oxygen in season-dependent manner. HaCaT cells containing PM2.5 and irradiated with UV-Vis exhibited oxidative stress features–increased peroxidation of intracellular lipids, decrease of mitochondrial membrane potential, enhanced expression of oxidative stress related genes and apoptotic cell death. The data indicate that sunlight can significantly increase PM2.5-mediated toxicity in skin cells.

Recent publications

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Sopel J., Sarad K., Kozińska A., Mokrzyński K., Szczygieł D., Murzyn A., Drzał A., Słomiński A., Szczygieł M., Elas M. (2026).
Pmel17 Deficiency Affects Melanogenesis and Promotes Tumor Vascularization. International Journal of Molecular Sciences.
Aliramezani A., Szewczyk G., Mokrzyński K., Ciastoń I., Nowicka B., Kwieciński JM. (2025).
Allelopathic compound 2-methoxy-1,4-naphthoquinone is broadly effective against pathogenic Prototheca species in vitro and in vivo. Antimicrobial Agents and Chemotherapy.
Mokrzyński K., Szewczyk G. (2025).
The (un)known issue with using rose bengal as a standard of singlet oxygen photoproduction. Photochemistry and Photobiology.

Conferences

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March 2026 — online
2n Junior Meeting of the European Society for Photobiology — talk
February 2026 — Stryszawa, Poland
53rd Winter School of FBBB 2026 — poster
February 2026 — Stryszawa, Poland
53rd Winter School of FBBB 2026 — oral

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